MolNFT v1 · #24286 · DNA

Self-complementary DNA 5'-D(CGATCG)2, NMR, minimized average structure

1UQD · DNA (5'-D(*CP*GP*AP*TP*CP*G)-3'): “Self-complementary DNA 5'-D(CGATCG)2, NMR, minimized average structure”. Solution nmr. MolNFT v1 #24286 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1UQD
Type: DNA
Length: 12 nucleotides
Chains: 2
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: DNA (5'-D(*CP*GP*AP*TP*CP*G)-3')

Structure

solution nmr · 1 distinct chain.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	DNA (5'-D(CPGPAPTPCPG)-3')	dna	6	—	—

Interfaces

1 interface between chains.

A–B · 289 Å² buried · 35 hydrogen bonds · nucleic-nucleic

Compared structures

1UQD · Self-complementary DNA 5'-D(CGATCG)2, NMR, minimized average structure · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Elsewhere: RCSB PDB 1UQD · PDBe 1UQD

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