MolNFT v1 · #23795 · protein

Crystal structure of mazef complex

1UB4 · Mazf protein: “Crystal structure of mazef complex”. X-ray diffraction, 3 pockets (best druggability 0.60). MolNFT v1 #23795 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1UB4
Type: protein
Length: 278 residues
Chains: 3
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Mazf protein; Maze protein
UniProt: P33645, P18534
Pockets: 3 · best druggability 0.60

Structure

x-ray diffraction · 3 distinct chains · 23% helix, 29% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Mazf protein	protein	103	25% helix, 34% strand	P33645
B	Mazf protein	protein	100	25% helix, 31% strand	P33645
C	Maze protein	protein	75	16% helix, 19% strand	P18534

Pockets

3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	318	0.60	0.78	49	empty
2	149	0.43	0.75	27	empty
3	113	0.38	0.74	15	empty

Interfaces

3 interfaces between chains.

A–C · 1458 Å² buried · 14 hydrogen bonds · protein-protein
A–B · 822 Å² buried · 5 hydrogen bonds · protein-protein
B–C · 426 Å² buried · 4 hydrogen bonds · protein-protein

Compared structures

1UB4 · crystal structure of MazEF complex · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P33645
Every structure of UniProt P18534
Elsewhere: RCSB PDB 1UB4 · PDBe 1UB4 · UniProt P33645 · UniProt P18534

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