MolNFT v1 · #23437 · protein

Footand mouth disease virus RNA-dependent RNA polymerase

1U09 · Polyprotein: “Footand mouth disease virus RNA-dependent RNA polymerase”. X-ray diffraction, 2 pockets (best druggability 0.59). MolNFT v1 #23437 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1U09
Type: protein
Length: 476 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Polyprotein
EC: 2.7.7.48
UniProt: Q9QCE4
Pockets: 2 · best druggability 0.59

Structure

x-ray diffraction · 1 distinct chain · 43% helix, 19% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Polyprotein (EC 2.7.7.48)	protein	476	43% helix, 19% strand	Q9QCE4

Pockets

2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	426	0.59	0.75	56	empty
2	337	0.53	0.74	31	empty

Compared structures

1U09 · Footand Mouth Disease Virus RNA-dependent RNA polymerase · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9QCE4
Elsewhere: RCSB PDB 1U09 · PDBe 1U09 · UniProt Q9QCE4

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