MolNFT v1 · #23422 · protein

T. maritima nusb, P21

1TZT · N utilization substance protein B homolog: “T. maritima nusb, P21”. X-ray diffraction, 1 ligand (SO4), 3 pockets (best druggability 0.39). MolNFT v1 #23422 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1TZT
Type: protein
Length: 282 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: N utilization substance protein B homolog
UniProt: Q9X286
Ligands: SO4
Pockets: 3 · best druggability 0.39

Structure

x-ray diffraction · 1 distinct chain · 73% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	N utilization substance protein B homolog	protein	141	73% helix, 0% strand	Q9X286

Ligands and binding sites

SO4 · Sulfate ion · ion · 2 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	52	0.39	0.81	11	empty
2	51	0.34	0.78	11	empty
3	74	0.28	0.72	19	empty

Interfaces

1 interface between chains.

A–B · 166 Å² buried · 4 hydrogen bonds · protein-protein

Compared structures

1TZT · T. maritima NusB, P21 · the same entry in another collection · chain A against A, TM-score 1.00
Q9X286 · AlphaFold monomer V2.0 prediction for transcription antitermination protein nusb (Q9X286) · a predicted model of the same protein · chain A against A, TM-score 0.97

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9X286
Elsewhere: RCSB PDB 1TZT · PDBe 1TZT · UniProt Q9X286

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