MolNFT v1 · #23286 · protein

Structure of ytnj from bacillus subtilis

1TVL · Protein ytnj: “Structure of ytnj from bacillus subtilis”. X-ray diffraction, 4 pockets (best druggability 0.64). MolNFT v1 #23286 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1TVL
Type: protein
Length: 390 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Protein ytnj
EC: 1.14.13.-
UniProt: O34974
Pockets: 4 · best druggability 0.64

Structure

x-ray diffraction · 1 distinct chain · 41% helix, 14% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Protein ytnj (EC 1.14.13.-)	protein	390	41% helix, 14% strand	O34974

Pockets

4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	558	0.64	0.76	67	empty
2	73	0.50	0.84	19	empty
3	71	0.34	0.76	21	empty
4	51	0.30	0.76	12	empty

Compared structures

1TVL · Structure of YTNJ from Bacillus subtilis · the same entry in another collection · chain A against A, TM-score 1.00
O34974 · AlphaFold monomer V2.0 prediction for putative monooxygenase moxc (O34974) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O34974
Elsewhere: RCSB PDB 1TVL · PDBe 1TVL · UniProt O34974

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.