MolNFT v1 · #23250 · protein

Solution structure of the honey bee general odorant binding protein ASP2 in complex with trimethylsilyl-D4 propionate

1TUJ: “Solution structure of the honey bee general odorant binding protein ASP2 in complex with trimethylsilyl-D4…”. Solution nmr, 1 ligand (TSD), 1 pocket (best druggability 0.75). MolNFT v1 #23250 on GenesisL1: 3D structure, binding…

PDB: 1TUJ
Type: protein
Length: 123 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Odorant binding protein ASP2
UniProt: Q9U9J5
Ligands: TSD
Pockets: 1 · best druggability 0.75

Structure

solution nmr · 1 distinct chain · 59% helix, 3% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Odorant binding protein ASP2	protein	123	59% helix, 3% strand	Q9U9J5

Ligands and binding sites

TSD · 3-trimethylsilyl-propionate-2,2,3,3,-D4 · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	330	0.75	0.86	30	TSD

Modifications

Observed in the structure: 3 disulfide (disulfide).

Compared structures

1TUJ · Solution structure of the honey bee general odorant binding protein ASP2 in complex with… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9U9J5
Elsewhere: RCSB PDB 1TUJ · PDBe 1TUJ · UniProt Q9U9J5

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