MolNFT v1 · #23190 · protein
Crystal structure of decamer NCP1 substrate peptide in complex with wild-type D25N HIV-1 protease variant
1TSU · Pol polyprotein: “Crystal structure of decamer NCP1 substrate peptide in complex with wild-type D25N HIV-1 protease variant”. X-ray diffraction. MolNFT v1 #23190 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 1TSU
- Type
- protein
- Length
- 206 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Pol polyprotein; Nc-P1 substrate peptide
- EC
- 3.4.23.16
- UniProt
- P03369, P04591
Structure
x-ray diffraction · 2 distinct chains · 7% helix, 59% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Pol polyprotein (EC 3.4.23.16) | protein | 99 | 7% helix, 60% strand | P03369 |
| P | Nc-P1 substrate peptide | protein | 8 | 0% helix, 50% strand | P04591 |
Interfaces
3 interfaces between chains.
- A–B · 1771 Ų buried · 36 hydrogen bonds · protein-protein
- A–P · 476 Ų buried · 5 hydrogen bonds · protein-protein
- B–P · 439 Ų buried · 7 hydrogen bonds · protein-protein
Compared structures
- 1TSU · Crystal structure of decamer NCP1 substrate peptide in complex with wild-type D25N HIV-1… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P03369
- Every structure of UniProt P04591
- Elsewhere: RCSB PDB 1TSU · PDBe 1TSU · UniProt P03369 · UniProt P04591
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