MolNFT v1 · #23134 · protein
Crystal structure of PFAL009167 a putative D-ribulose 5-phosphate 3- epimerase from P.FALCIPARUM
1TQX · D-ribulose-5-phosphate 3-epimerase, putative: “Crystal structure of PFAL009167 a putative D-ribulose 5-phosphate 3- epimerase from P.FALCIPARUM”. X-ray diffraction, 2 ligands (ZN, SO4), 2 pockets (best druggability 0.62). MolNFT v1…
- PDB
- 1TQX
- Type
- protein
- Length
- 442 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- D-ribulose-5-phosphate 3-epimerase, putative
- UniProt
- Q8I5L3
- Ligands
- ZN, SO4
- Pockets
- 2 · best druggability 0.62
Structure
x-ray diffraction · 1 distinct chain · 44% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | D-ribulose-5-phosphate 3-epimerase, putative | protein | 221 | 44% helix, 21% strand | Q8I5L3 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 87 | 0.62 | 0.89 | 25 | SO4 |
| 2 | 87 | 0.62 | 0.90 | 25 | SO4 |
Compared structures
- 1TQX · Crystal Structure of Pfal009167 A Putative D-Ribulose 5-Phosphate 3-Epimerase from… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8I5L3
- Elsewhere: RCSB PDB 1TQX · PDBe 1TQX · UniProt Q8I5L3
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