MolNFT v1 · #2258 · protein

Ricin a chain (recombinant) complex with pteroic acid

1BR6 · Protein (ricin): “Ricin a chain (recombinant) complex with pteroic acid”. X-ray diffraction, 1 ligand (PT1), 3 pockets (best druggability 0.58). MolNFT v1 #2258 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1BR6
Type: protein
Length: 268 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Protein (ricin)
EC: 3.2.2.22
UniProt: P02879
Ligands: PT1
Pockets: 3 · best druggability 0.58

Structure

x-ray diffraction · 1 distinct chain · 39% helix, 22% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Protein (ricin) (EC 3.2.2.22)	protein	268	39% helix, 22% strand	P02879

Ligands and binding sites

PT1 · Pteroic acid · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	264	0.58	0.78	37	PT1
2	78	0.35	0.75	17	empty
3	61	0.34	0.76	12	empty

Compared structures

1BR6 · Ricin a chain (recombinant) complex with pteroic acid · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P02879
Elsewhere: RCSB PDB 1BR6 · PDBe 1BR6 · UniProt P02879

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.