MolNFT v1 · #21537 · protein
Crystal structure of restriction endonuclease bstyi
1SDO: “Crystal structure of restriction endonuclease bstyi”. X-ray diffraction, 2 pockets (best druggability 0.44). MolNFT v1 #21537 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 1SDO
- Type
- protein
- Length
- 192 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Bstyi
- EC
- 3.1.21.4
- UniProt
- Q84AF2
- Pockets
- 2 · best druggability 0.44
Structure
x-ray diffraction · 1 distinct chain · 45% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Bstyi (EC 3.1.21.4) | protein | 192 | 45% helix, 26% strand | Q84AF2 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 92 | 0.44 | 0.79 | 14 | empty |
| 2 | 56 | 0.30 | 0.75 | 18 | empty |
Compared structures
- 1SDO · Crystal Structure of Restriction Endonuclease BstYI · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q84AF2
- Elsewhere: RCSB PDB 1SDO · PDBe 1SDO · UniProt Q84AF2
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