MolNFT v1 · #21358 · protein
Riml- ribosomal L7/L12 alpha-N-protein acetyltransferase crystal form I (apo)
1S7F · Acetyl transferase: “Riml- ribosomal L7/L12 alpha-N-protein acetyltransferase crystal form I (apo)”. X-ray diffraction, 1 ligand (CL), 3 pockets (best druggability 0.51). MolNFT v1 #21358 on GenesisL1: 3D structure, binding sites…
- PDB
- 1S7F
- Type
- protein
- Length
- 181 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Acetyl transferase
- EC
- 2.3.1.-
- UniProt
- Q8ZPC0
- Ligands
- CL
- Pockets
- 3 · best druggability 0.51
Structure
x-ray diffraction · 1 distinct chain · 34% helix, 39% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Acetyl transferase (EC 2.3.1.-) | protein | 181 | 34% helix, 39% strand | Q8ZPC0 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 119 | 0.51 | 0.81 | 23 | MLA |
| 2 | 78 | 0.45 | 0.81 | 19 | empty |
| 3 | 50 | 0.38 | 0.81 | 19 | CL |
Compared structures
- 1S7F · RimL- Ribosomal L7/L12 alpha-N-protein acetyltransferase crystal form I (apo) · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8ZPC0
- Elsewhere: RCSB PDB 1S7F · PDBe 1S7F · UniProt Q8ZPC0
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