MolNFT v1 · #21343 · protein
2.3A crystal structure of phospho-beta-glucosidase
1S6Y · 6-phospho-beta-glucosidase: “2.3A crystal structure of phospho-beta-glucosidase”. X-ray diffraction, 3 pockets (best druggability 0.77). MolNFT v1 #21343 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 1S6Y
- Type
- protein
- Length
- 416 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- 6-phospho-beta-glucosidase
- EC
- 3.2.1.86
- UniProt
- P84135
- Pockets
- 3 · best druggability 0.77
Structure
x-ray diffraction · 1 distinct chain · 51% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 6-phospho-beta-glucosidase (EC 3.2.1.86) | protein | 416 | 51% helix, 17% strand | P84135 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 987 | 0.77 | 0.79 | 92 | empty |
| 2 | 155 | 0.54 | 0.81 | 22 | empty |
| 3 | 58 | 0.31 | 0.76 | 19 | empty |
Modifications
Observed in the structure: 9 modified (engineered).
Compared structures
- 1S6Y · 2.3A crystal structure of phospho-beta-glucosidase · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P84135
- Elsewhere: RCSB PDB 1S6Y · PDBe 1S6Y · UniProt P84135
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