MolNFT v1 · #21334 · protein
NMR structure of domain III of the west nile virus envelope protein, strain 385-99
1S6N · Envelope glycoprotein: “NMR structure of domain III of the west nile virus envelope protein, strain 385-99”. Solution nmr, 2 pockets (best druggability 0.50). MolNFT v1 #21334 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 1S6N
- Type
- protein
- Length
- 115 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Envelope glycoprotein
- UniProt
- Q913C7
- Pockets
- 2 · best druggability 0.50
Structure
solution nmr · 1 distinct chain · 0% helix, 43% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Envelope glycoprotein | protein | 115 | 0% helix, 43% strand | Q913C7 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 111 | 0.50 | 0.81 | 25 | empty |
| 2 | 117 | 0.39 | 0.75 | 22 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 1S6N · NMR Structure of Domain III of the West Nile Virus Envelope Protein, Strain 385-99 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q913C7
- Elsewhere: RCSB PDB 1S6N · PDBe 1S6N · UniProt Q913C7
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