MolNFT v1 · #21145 · protein
Crystal structure of the human roralpha ligand binding domain in complex with cholesterol sulfate at 2.2A
1S0X · Nuclear receptor ror-alpha: “Crystal structure of the human roralpha ligand binding domain in complex with cholesterol sulfate at 2.2A”. X-ray diffraction, 1 ligand (C3S), 2 pockets (best druggability 0.85). MolNFT v1 #21145 on…
- PDB
- 1S0X
- Type
- protein
- Length
- 251 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Nuclear receptor ror-alpha
- UniProt
- P35398
- Ligands
- C3S
- Pockets
- 2 · best druggability 0.85
Structure
x-ray diffraction · 1 distinct chain · 74% helix, 4% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nuclear receptor ror-alpha | protein | 251 | 74% helix, 4% strand | P35398 |
Ligands and binding sites
- C3S · Cholest-5-en-3-yl hydrogen sulfate · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 385 | 0.85 | 0.93 | 40 | C3S |
| 2 | 57 | 0.30 | 0.76 | 19 | empty |
Compared structures
- 1S0X · Crystal structure of the human RORalpha ligand binding domain in complex with cholesterol… · the same entry in another collection · chain A against A, TM-score 1.00
- P35398 · AlphaFold monomer V2.0 prediction for nuclear receptor ror-alpha (P35398) · a predicted model of the same protein · chain A against A, TM-score 0.95
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P35398
- Elsewhere: RCSB PDB 1S0X · PDBe 1S0X · UniProt P35398
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.