MolNFT v1 · #20616 · protein
Structure of the cytosolic protein pym bound to the mago-Y14 core of the exon junction complex
1RK8: “Structure of the cytosolic protein pym bound to the mago-Y14 core of the exon junction complex”. X-ray diffraction. MolNFT v1 #20616 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 1RK8
- Type
- protein
- Length
- 247 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q9V535, P49028, P82804
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 87 | — | Q9V535 |
| B | — | protein | 127 | — | P49028 |
| C | — | protein | 33 | — | P82804 |
Compared structures
- 1RK8 · Structure of the cytosolic protein PYM bound to the Mago-Y14 core of the exon junction… · the same entry in another collection · chain A against A, TM-score 1.00
- Q9V535 · AlphaFold monomer V2.0 prediction for RNA-binding protein 8A (Q9V535) · a predicted model of the same protein · chain A against A, TM-score 0.99
- P49028 · AlphaFold monomer V2.0 prediction for protein mago nashi (P49028) · a predicted model of the same protein · chain B against A, TM-score 0.98
- P82804 · AlphaFold monomer V2.0 prediction for partner of Y14 and mago (P82804) · a predicted model of the same protein · chain C against A, TM-score 0.90
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9V535
- Every structure of UniProt P49028
- Every structure of UniProt P82804
- Elsewhere: RCSB PDB 1RK8 · PDBe 1RK8 · UniProt Q9V535 · UniProt P49028 · UniProt P82804
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