MolNFT v1 · #19931 · protein

Structure of ycfc protein of unknown function escherichia COLI

1QZ4 · Hypothetical protein ycfc: “Structure of ycfc protein of unknown function escherichia COLI”. X-ray diffraction, 2 ligands (HG, PO4), 3 pockets (best druggability 0.47). MolNFT v1 #19931 on GenesisL1: 3D structure, binding sites and…

PDB: 1QZ4
Type: protein
Length: 213 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Hypothetical protein ycfc
UniProt: P25746
Ligands: HG, PO4
Pockets: 3 · best druggability 0.47

Structure

x-ray diffraction · 1 distinct chain · 73% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Hypothetical protein ycfc	protein	213	73% helix, 0% strand	P25746

Ligands and binding sites

HG · Mercury (II) ion · metal · 10 copies · chains A
PO4 · Phosphate ion · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	115	0.47	0.78	20	HG
2	90	0.38	0.76	17	HG
3	61	0.30	0.74	13	empty

Compared structures

1QZ4 · Structure of YcfC Protein of Unknown Function Escherichia coli · the same entry in another collection · chain A against A, TM-score 1.00
P25746 · AlphaFold monomer V2.0 prediction for high frequency lysogenization protein hfld (P25746) · a predicted model of the same protein · chain A against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P25746
Elsewhere: RCSB PDB 1QZ4 · PDBe 1QZ4 · UniProt P25746

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