MolNFT v1 · #19591 · protein

Cen (centroradialis) protein from antirrhinum

1QOU: “Cen (centroradialis) protein from antirrhinum”. X-ray diffraction, 2 pockets (best druggability 0.82). MolNFT v1 #19591 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1QOU
Type: protein
Length: 315 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Cen
UniProt: Q41261
Pockets: 2 · best druggability 0.82

Structure

x-ray diffraction · 2 distinct chains · 11% helix, 33% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Cen	protein	154	8% helix, 34% strand	Q41261
B	Cen	protein	161	13% helix, 33% strand	Q41261

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	299	0.82	0.93	42	empty
2	51	0.27	0.74	15	empty

Interfaces

1 interface between chains.

A–B · 620 Å² buried · 15 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 1 disulfide (disulfide).

Compared structures

1QOU · CEN (Centroradialis) protein from Antirrhinum · the same entry in another collection · chain A against A, TM-score 1.00
Q41261 · AlphaFold monomer V2.0 prediction for protein centroradialis (Q41261) · a predicted model of the same protein · chain B against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q41261
Elsewhere: RCSB PDB 1QOU · PDBe 1QOU · UniProt Q41261

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