MolNFT v1 · #19399 · protein

Crystal structure of the outer membrane protein ompx from escherichia COLI

1QJ8 · Outer membrane protein X: “Crystal structure of the outer membrane protein ompx from escherichia COLI”. X-ray diffraction, 1 ligand (PCL), 1 pocket (best druggability 0.53). MolNFT v1 #19399 on GenesisL1: 3D structure, binding sites…

PDB: 1QJ8
Type: protein
Length: 148 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Outer membrane protein X
UniProt: P36546
Ligands: PCL
Pockets: 1 · best druggability 0.53

Structure

x-ray diffraction · 1 distinct chain · 0% helix, 82% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Outer membrane protein X	protein	148	0% helix, 82% strand	P36546

Ligands and binding sites

PCL · Platinum(ii) di-chloride · ligand · 2 copies · chains A
C8E · (hydroxyethyloxy)tri(ethyloxy)octane · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	104	0.53	0.82	19	empty

Compared structures

1QJ8 · Crystal structure of the outer membrane protein ompx from escherichia COLI · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P36546
Elsewhere: RCSB PDB 1QJ8 · PDBe 1QJ8 · UniProt P36546

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