MolNFT v1 · #19275 · protein + RNA
Bacteriophage lambda N-protein-nutboxb-RNA complex
1QFQ · 15-mer nutrboxb RNA hairpin: “Bacteriophage lambda N-protein-nutboxb-RNA complex”. Solution nmr. MolNFT v1 #19275 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 1QFQ
- Type
- protein + RNA
- Length
- 50 residues
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- 15-mer nutrboxb RNA hairpin; 36-mer N-terminal peptide of the N protein
- UniProt
- P03045
Structure
solution nmr · 2 distinct chains · 54% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 15-mer nutrboxb RNA hairpin | rna | 15 | — | — |
| B | 36-mer N-terminal peptide of the N protein | protein | 35 | 54% helix, 0% strand | P03045 |
Interfaces
1 interface between chains.
- A–B · 659 Ų buried · 28 hydrogen bonds · protein-nucleic
Compared structures
- 1QFQ · Bacteriophage Lambda N-protein-NutboxB-RNA Complex · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P03045
- Elsewhere: RCSB PDB 1QFQ · PDBe 1QFQ · UniProt P03045
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