MolNFT v1 · #19222 · DNA
The NMR study of DNA quadruplex structure, aptamer (15MER) DNA
1QDH · DNA (5'-D(*GP*GP*TP*TP*GP*GP*TP*GP*TP*GP*GP*TP*TP*GP*G)- 3'): “The NMR study of DNA quadruplex structure, aptamer (15MER) DNA”. Solution nmr, 1 ligand (MN). MolNFT v1 #19222 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 1QDH
- Type
- DNA
- Length
- 15 nucleotides
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- DNA (5'-D(*GP*GP*TP*TP*GP*GP*TP*GP*TP*GP*GP*TP*TP*GP*G)- 3')
- Ligands
- MN
Structure
solution nmr · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA (5'-D(*GP*GP*TP*TP*GP*GP*TP*GP*TP*GP*GP*TP*TP*GP*G)- 3') | dna | 15 | — | — |
Ligands and binding sites
- MN · Manganese (II) ion · metal · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 1QDH · The NMR study of DNA quadruplex structure, aptamer (15MER) DNA · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 1QDH · PDBe 1QDH
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