MolNFT v1 · #19220 · protein
Crystal structure of the ATPase domain of translation initiation factor 4A from saccharomyces cerevisiae-the prototype of the dead box protein family
1QDE: “Crystal structure of the ATPase domain of translation initiation factor 4A from saccharomyces cerevisiae-the…”. X-ray diffraction, 1 ligand (SO4). MolNFT v1 #19220 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 1QDE
- Type
- protein
- Length
- 201 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Translation initiation factor 4A
- UniProt
- P10081
- Ligands
- SO4
Structure
x-ray diffraction · 1 distinct chain · 43% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Translation initiation factor 4A | protein | 201 | 43% helix, 15% strand | P10081 |
Ligands and binding sites
- SO4 · Sulfate ion · ion · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 1QDE · Crystal structure of the ATPase domain of translation initiation factor 4A from… · the same entry in another collection · chain A against A, TM-score 1.00
- P10081 · AlphaFold monomer V2.0 prediction for ATP-dependent RNA helicase EIF4A (P10081) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P10081
- Elsewhere: RCSB PDB 1QDE · PDBe 1QDE · UniProt P10081
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