MolNFT v1 · #191306 · protein
Crystal structure of aminopeptidase a from neisseria gonorrhoeae
8D1X: “Crystal structure of aminopeptidase a from neisseria gonorrhoeae”. X-ray diffraction, 2 ligands (MN, CL). MolNFT v1 #191306 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 8D1X
- Type
- protein
- Length
- 2,809 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- B4RJ22
- Ligands
- MN, CL
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, E | — | protein | 468 | — | B4RJ22 |
| C | — | protein | 467 | — | B4RJ22 |
| D, F | — | protein | 469 | — | B4RJ22 |
Ligands and binding sites
- MN · Manganese (II) ion · metal · 6 copies · chains A, B, C, D, E, F
- CL · Chloride ion · ion · 6 copies · chains A, B, C, D, E, F
- TAR · D(-)-tartaric acid · additive · 6 copies · chains A, B, C, D, E, F
- ACT · Acetate ion · additive · 4 copies · chains A, B, E, F
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 8D1X · Crystal Structure of aminopeptidase A from Neisseria gonorrhoeae · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B4RJ22
- Elsewhere: RCSB PDB 8D1X · PDBe 8D1X · UniProt B4RJ22
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