MolNFT v1 · #191223 · protein
Crystal structure of orotidine 5'-phosphate decarboxylase from klebsiella pneumoniae in complex with uridine-5'-monophosphate
8CSO: “Crystal structure of orotidine 5'-phosphate decarboxylase from klebsiella pneumoniae in complex with…”. X-ray diffraction, 1 ligand (U5P). MolNFT v1 #191223 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 8CSO
- Type
- protein
- Length
- 2,191 residues
- Chains
- 10
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A0H3GNE4
- Ligands
- U5P
Structure
x-ray diffraction · 8 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | protein | 229 | — | A0A0H3GNE4 |
| C | — | protein | 231 | — | A0A0H3GNE4 |
| D | — | protein | 221 | — | A0A0H3GNE4 |
| E, F | — | protein | 231 | — | A0A0H3GNE4 |
| G | — | protein | 206 | — | A0A0H3GNE4 |
| H | — | protein | 212 | — | A0A0H3GNE4 |
| I | — | protein | 217 | — | A0A0H3GNE4 |
| J | — | protein | 184 | — | A0A0H3GNE4 |
Ligands and binding sites
- U5P · Uridine-5'-monophosphate · ligand · 5 copies · chains A, B, C, D, E, F
- EDO · 1,2-ethanediol · additive · 3 copies · chains B, C, E, F
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 8CSO · Crystal Structure of Orotidine 5'-phosphate decarboxylase from Klebsiella pneumoniae in… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0H3GNE4
- Elsewhere: RCSB PDB 8CSO · PDBe 8CSO · UniProt A0A0H3GNE4
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