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MolNFT v1 · #191192 · protein

Crystal structure of IDO1 in complex with apoxidole-1

8ABX: “Crystal structure of IDO1 in complex with apoxidole-1”. X-ray diffraction, 2 ligands (N39, N2U). MolNFT v1 #191192 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
8ABX
Type
protein
Length
369 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P14902
Ligands
N39, N2U

Structure

x-ray diffraction · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein369—P14902

Ligands and binding sites

  • N39 · O1-tert-butyl O2-ethyl O5-methyl (E,5R)-5-(1-methylindol-2-yl)-5-[(4-methylphenyl) sulfonylamino]pent-2-ene-1,2,5-tricarboxylate · ligand · chains A
  • N2U · O2-tert-butyl O3-ethyl O6-methyl (2S,6R)-6-(1-methylindol-2-yl)-2,5-dihydro-1H-pyridine-2,3,6-tricarboxylate · ligand · chains A
  • PGE · Triethylene glycol · additive · 5 copies · chains A
  • PG4 · Tetraethylene glycol · additive · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 8ABX · Crystal structure of IDO1 in complex with Apoxidole-1 · the same entry in another collection · chain A against A, TM-score 1.00
  • P14902 · AlphaFold monomer V2.0 prediction for indoleamine 2,3-dioxygenase 1 (P14902) · a predicted model of the same protein · chain A against A, TM-score 0.98

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