MolNFT v1 · #191113 · protein
Crystal structure of poplar glutathione transferase U19 in complex with glutathione
7ZVP: “Crystal structure of poplar glutathione transferase U19 in complex with glutathione”. X-ray diffraction, 1 ligand (GS8), 3 pockets (best druggability 0.64). MolNFT v1 #191113 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 7ZVP
- Type
- protein
- Length
- 216 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Glutathione transferase
- EC
- 2.5.1.18
- UniProt
- B9HKX9
- Ligands
- GS8
- Pockets
- 3 · best druggability 0.64
Structure
x-ray diffraction · 1 distinct chain · 57% helix, 10% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Glutathione transferase (EC 2.5.1.18) | protein | 216 | 57% helix, 10% strand | B9HKX9 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 231 | 0.64 | 0.82 | 35 | empty |
| 2 | 142 | 0.41 | 0.74 | 20 | GS8 |
| 3 | 54 | 0.31 | 0.76 | 12 | ACT |
Compared structures
- 7ZVP · Crystal structure of poplar glutathione transferase U19 in complex with glutathione · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B9HKX9
- Elsewhere: RCSB PDB 7ZVP · PDBe 7ZVP · UniProt B9HKX9
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