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MolNFT v1 · #191031 · protein + RNA

Polymerase module of cpf in complex with MPE1 and a pre-cleaved CYC1 RNA

7ZGP: “Polymerase module of cpf in complex with MPE1 and a pre-cleaved CYC1 RNA”. Electron microscopy, 1 ligand (ZN). MolNFT v1 #191031 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
7ZGP
Type
protein + RNA
Length
1,770 residues
Chains
5
Method
electron microscopy
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
Q06632, A0A6A5Q2R8, A0A6A5Q543, A0A6A5PV64
Ligands
ZN

Structure

electron microscopy · 5 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein1236—Q06632
B—protein93—A0A6A5Q2R8
D—protein392—A0A6A5Q543
E—rna3——
F—protein46—A0A6A5PV64

Ligands and binding sites

  • ZN · Zinc ion · metal · 2 copies · chains B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7ZGP · Polymerase module of CPF in complex with Mpe1 and a pre-cleaved CYC1 RNA · the same entry in another collection · chain A against A, TM-score 1.00
  • Q06632 · AlphaFold monomer V2.0 prediction for protein CFT1 (Q06632) · a predicted model of the same protein · chain A against A, TM-score 0.99

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