MolNFT v1 · #190993 · protein
Crystal structure of the E352T mutant of S-adenosyl-L-homocysteine hydrolase from synechocystis sp. pcc 6803 cocrystallized with adenosine in the presence of rb+ cations
7ZD9: “Crystal structure of the E352T mutant of S-adenosyl-L-homocysteine hydrolase from synechocystis sp. pcc 6803…”. X-ray diffraction, 4 ligands (NAD, ADN, RB). MolNFT v1 #190993 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 7ZD9
- Type
- protein
- Length
- 834 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P74008
- Ligands
- NAD, ADN, RB, CL
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, C | — | protein | 417 | — | P74008 |
Ligands and binding sites
- NAD · Nicotinamide-adenine-dinucleotide · ligand · 2 copies · chains A, C
- ADN · Adenosine · ligand · 2 copies · chains A, C
- RB · Rubidium ion · metal · 3 copies · chains A, C
- CL · Chloride ion · ion · 2 copies · chains A, C
- GOL · Glycerol · additive · chains C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7ZD9 · Crystal structure of the E352T mutant of S-adenosyl-L-homocysteine hydrolase from… · the same entry in another collection · chain A against A, TM-score 1.00
- P74008 · AlphaFold monomer V2.0 prediction for adenosylhomocysteinase (P74008) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P74008
- Elsewhere: RCSB PDB 7ZD9 · PDBe 7ZD9 · UniProt P74008
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