MolNFT v1 · #190948 · protein
Catalytic subunit hisg R56A mutant from psychrobacter arcticus atpprt (hisgz) in complex with ATP and prpp
7Z8U · ATP phosphoribosyltransferase: “Catalytic subunit hisg R56A mutant from psychrobacter arcticus atpprt (hisgz) in complex with ATP and prpp”. X-ray diffraction, 3 ligands (PRP, ATP, MG), 1 pocket (best druggability 0.54). MolNFT v1…
- PDB
- 7Z8U
- Type
- protein
- Length
- 207 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- ATP phosphoribosyltransferase
- EC
- 2.4.2.17
- UniProt
- Q4FQF7
- Ligands
- PRP, ATP, MG
- Pockets
- 1 · best druggability 0.54
Structure
x-ray diffraction · 1 distinct chain · 35% helix, 31% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | ATP phosphoribosyltransferase (EC 2.4.2.17) | protein | 207 | 35% helix, 31% strand | Q4FQF7 |
Ligands and binding sites
- PRP · 1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose · ligand · chains A
- ATP · Adenosine-5'-triphosphate · ligand · chains A
- MG · Magnesium ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 262 | 0.54 | 0.76 | 41 | PRP, ATP |
Compared structures
- 7Z8U · Catalytic subunit HisG R56A mutant from Psychrobacter arcticus ATPPRT (HisGZ) in complex… · the same entry in another collection · chain A against A, TM-score 1.00
- Q4FQF7 · AlphaFold monomer V2.0 prediction for ATP phosphoribosyltransferase (Q4FQF7) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q4FQF7
- Elsewhere: RCSB PDB 7Z8U · PDBe 7Z8U · UniProt Q4FQF7
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