MolNFT v1 · #190750 · protein
Crystal structure of stenoloma chusanum chalcone synthase 1 (SCCHS1)
7YJ5: “Crystal structure of stenoloma chusanum chalcone synthase 1 (SCCHS1)”. X-ray diffraction, 1 ligand (TMO), 1 pocket (best druggability 0.72). MolNFT v1 #190750 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7YJ5
- Type
- protein
- Length
- 389 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Stenoloma chusanum chalcone synthase 1 (SCCHS1)
- Ligands
- TMO
- Pockets
- 1 · best druggability 0.72
Structure
x-ray diffraction · 1 distinct chain · 41% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Stenoloma chusanum chalcone synthase 1 (SCCHS1) | protein | 389 | 41% helix, 23% strand | — |
Ligands and binding sites
- TMO · trimethylamine oxide · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 312 | 0.72 | 0.84 | 53 | empty |
Compared structures
- 7YJ5 · Crystal structure of Stenoloma chusanum chalcone synthase 1 (ScCHS1) · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 7YJ5 · PDBe 7YJ5
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