MolNFT v1 · #190670 · protein
Structure of SARS-cov-2 spike protein with engineered X3 disulfide (X3(D427C, V987C) and single arg S1/S2 cleavage site), locked-211 conformation
7XU0: “Structure of SARS-cov-2 spike protein with engineered X3 disulfide (X3(D427C, V987C) and single arg S1/S2…”. Electron microscopy, 3 ligands (EIC, BLA, NAG). MolNFT v1 #190670 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 7XU0
- Type
- protein
- Length
- 3,300 residues
- Chains
- 3
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P0DTC2
- Ligands
- EIC, BLA, NAG
Structure
electron microscopy · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 1110 | — | P0DTC2 |
| B | — | protein | 1097 | — | P0DTC2 |
| C | — | protein | 1093 | — | P0DTC2 |
Ligands and binding sites
- EIC · Linoleic acid · ligand · 3 copies · chains A, B, C
- BLA · Biliverdine IX alpha · ligand · 3 copies · chains A, B, C
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 66 copies · chains A, B, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7XU0 · Structure of SARS-CoV-2 Spike Protein with Engineered x3 Disulfide (x3(D427C, V987C) and… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0DTC2
- Elsewhere: RCSB PDB 7XU0 · PDBe 7XU0 · UniProt P0DTC2
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