MolNFT v1 · #190579 · protein
Crystal structure of engineered HIV-1 reverse transcriptase RNase H domain complexed with nitrofuran METHOXY(METHOXYCARBONYL)PHENYL ester
7XJ5: “Crystal structure of engineered HIV-1 reverse transcriptase RNase H domain complexed with nitrofuran…”. X-ray diffraction, 3 ligands (ECW, MN, ZN). MolNFT v1 #190579 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7XJ5
- Type
- protein
- Length
- 146 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Reverse transcriptase RNase H domain
- EC
- 3.1.26.13
- UniProt
- A0A059PIR4, A0A7L9QW77
- Ligands
- ECW, MN, ZN
Structure
x-ray diffraction · 1 distinct chain · 33% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Reverse transcriptase RNase H domain (EC 3.1.26.13) | protein | 146 | 33% helix, 23% strand | A0A059PIR4, A0A7L9QW77 |
Ligands and binding sites
- ECW · [2-[tert-butyl-(phenylmethyl)amino]-2-oxidanylidene-ethyl] 4-bromanyl-5-nitro-furan-2-carboxylate · ligand · chains A
- MN · Manganese (II) ion · metal · 2 copies · chains A
- ZN · Zinc ion · metal · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7XJ5 · Crystal structure of engineered HIV-1 Reverse Transcriptase RNase H domain complexed with… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A059PIR4
- Every structure of UniProt A0A7L9QW77
- Elsewhere: RCSB PDB 7XJ5 · PDBe 7XJ5 · UniProt A0A059PIR4 · UniProt A0A7L9QW77
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