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MolNFT v1 · #190555 · protein

Crystal structure of csn-pd from paenibacillus dendritiformis

7XH0 · Chitosanase: “Crystal structure of csn-pd from paenibacillus dendritiformis”. X-ray diffraction, 1 pocket (best druggability 0.52). MolNFT v1 #190555 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
7XH0
Type
protein
Length
258 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Chitosanase
EC
3.2.1.132
UniProt
A0A2W4GVN6
Pockets
1 · best druggability 0.52

Structure

x-ray diffraction · 1 distinct chain · 54% helix, 6% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AChitosanase (EC 3.2.1.132)protein25854% helix, 6% strandA0A2W4GVN6

Ligands and binding sites

  • FLC · Citrate anion · additive · chains A
  • EDO · 1,2-ethanediol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
12660.520.7539empty

Compared structures

  • 7XH0 · crystal structure of Csn-PD from Paenibacillus dendritiformis · the same entry in another collection · chain A against A, TM-score 1.00

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