MolNFT v1 · #190415 · protein
Structure of USH1C PDZ2 and coiled-coil in complex with CDHR2 C- terminal tail
7X2E · Harmonin: “Structure of USH1C PDZ2 and coiled-coil in complex with CDHR2 C- terminal tail”. X-ray diffraction. MolNFT v1 #190415 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7X2E
- Type
- protein
- Length
- 170 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Harmonin; Cadherin-related family member 2
- UniProt
- Q9Y6N9, E9Q7P9
Structure
x-ray diffraction · 2 distinct chains · 49% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Harmonin | protein | 163 | 52% helix, 18% strand | Q9Y6N9 |
| B | Cadherin-related family member 2 | protein | 7 | 0% helix, 43% strand | E9Q7P9 |
Ligands and binding sites
- GOL · Glycerol · additive · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 471 Ų buried · 11 hydrogen bonds · protein-protein
Compared structures
- 7X2E · Structure of USH1C PDZ2 and coiled-coil in complex with CDHR2 C-terminal tail · the same entry in another collection · chain A against A, TM-score 1.00
- Q9Y6N9 · AlphaFold monomer V2.0 prediction for harmonin (Q9Y6N9) · a predicted model of the same protein · chain A against A, TM-score 0.74
- E9Q7P9 · AlphaFold monomer V2.0 prediction for cadherin-related family member 2 (E9Q7P9) · a predicted model of the same protein · chain B against A, TM-score 0.47
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9Y6N9
- Every structure of UniProt E9Q7P9
- Elsewhere: RCSB PDB 7X2E · PDBe 7X2E · UniProt Q9Y6N9 · UniProt E9Q7P9
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