MolNFT v1 · #190379 · protein
Crystal structure of pl-5 family polysaccharide lyase panpl-N171L mutant from pandoraea apista in apo form
7WXR · POLY(BETA-D-mannuronate) lyase: “Crystal structure of pl-5 family polysaccharide lyase panpl-N171L mutant from pandoraea apista in apo form”. X-ray diffraction, 1 pocket (best druggability 0.62). MolNFT v1 #190379 on GenesisL1: 3D…
- PDB
- 7WXR
- Type
- protein
- Length
- 311 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- POLY(BETA-D-mannuronate) lyase
- EC
- 4.2.2.3
- Pockets
- 1 · best druggability 0.62
Structure
x-ray diffraction · 1 distinct chain · 65% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | POLY(BETA-D-mannuronate) lyase (EC 4.2.2.3) | protein | 311 | 65% helix, 3% strand | — |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 419 | 0.62 | 0.76 | 55 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 7WXR · Crystal Structure of PL-5 family polysaccharide lyase PanPL-N171L mutant from Pandoraea… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 7WXR · PDBe 7WXR
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