MolNFT v1 · #190134 · protein
Crystal structure of HLA-C*1402 complexed with 8-mer HIV gag peptide
7WJ2: “Crystal structure of HLA-C*1402 complexed with 8-mer HIV gag peptide”. X-ray diffraction, 1 ligand (NA). MolNFT v1 #190134 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7WJ2
- Type
- protein
- Length
- 384 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A890UPS4, P61769
- Ligands
- NA
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 276 | — | A0A890UPS4 |
| B | — | protein | 100 | — | P61769 |
| C | — | protein | 8 | — | — |
Ligands and binding sites
- NA · Sodium ion · metal · chains A, B
- EDO · 1,2-ethanediol · additive · 7 copies · chains A, B
- ACT · Acetate ion · additive · chains B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7WJ2 · Crystal structure of HLA-C*1402 complexed with 8-mer HIV gag peptide · the same entry in another collection · chain A against A, TM-score 1.00
- P61769 · AlphaFold monomer V2.0 prediction for beta-2-microglobulin (P61769) · a predicted model of the same protein · chain B against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A890UPS4
- Every structure of UniProt P61769
- Elsewhere: RCSB PDB 7WJ2 · PDBe 7WJ2 · UniProt A0A890UPS4 · UniProt P61769
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