MolNFT v1 · #190124 · protein
SARS-cov-2 omicron variant spike in complex with three human neutralizing antibodies
7WI0: “SARS-cov-2 omicron variant spike in complex with three human neutralizing antibodies”. Electron microscopy, 1 ligand (NAG). MolNFT v1 #190124 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7WI0
- Type
- protein
- Length
- 886 residues
- Chains
- 7
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P0DTC2, A0A5C2G4I7, A0A5C2GTV1, A0A5C2GVU3
- Ligands
- NAG
Structure
electron microscopy · 7 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 194 | — | P0DTC2 |
| B | — | protein | 123 | — | — |
| C | — | protein | 122 | — | — |
| D | — | protein | 107 | — | A0A5C2G4I7 |
| E | — | protein | 107 | — | A0A5C2GTV1 |
| H | — | protein | 123 | — | — |
| L | — | protein | 110 | — | A0A5C2GVU3 |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7WI0 · SARS-CoV-2 Omicron variant spike in complex with three human neutralizing antibodies · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0DTC2
- Every structure of UniProt A0A5C2G4I7
- Every structure of UniProt A0A5C2GTV1
- Every structure of UniProt A0A5C2GVU3
- Elsewhere: RCSB PDB 7WI0 · PDBe 7WI0 · UniProt P0DTC2 · UniProt A0A5C2G4I7 · UniProt A0A5C2GTV1 · UniProt A0A5C2GVU3
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