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MolNFT v1 · #190085 · protein

Subcomplexes B,M and L in the cylic electron transfer supercomplex ndh-psi from arabidopsis

7WFF: “Subcomplexes B,M and L in the cylic electron transfer supercomplex ndh-psi from arabidopsis”. Electron microscopy, 3 ligands (LHG, SQD, FES). MolNFT v1 #190085 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
7WFF
Type
protein
Length
4,065 residues
Chains
17
Method
electron microscopy
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
Q37165, A0A1B1W4Z4, P56751, A0A1B1W4Z0, P26289, P56752, Q95695, Q9S9N6, Q94AQ8, Q9LU21, B3H6Z4, Q9FG89, O80634, Q9XI73, Q9SGH4, Q9SCY3, Q9ASS6
Ligands
LHG, SQD, FES

Structure

electron microscopy · 17 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein305—Q37165
B—protein486—A0A1B1W4Z4
C—protein94—P56751
D—protein497—A0A1B1W4Z0
E—protein89—P26289
F—protein677—P56752
G—protein167—Q95695
a—protein341—Q9S9N6
b—protein307—Q94AQ8
c—protein128—Q9LU21
d—protein93—B3H6Z4
e—protein150—Q9FG89
f—protein153—O80634
g—protein115—Q9XI73
h—protein145—Q9SGH4
i—protein145—Q9SCY3
j—protein173—Q9ASS6

Ligands and binding sites

  • LHG · 1,2-dipalmitoyl-phosphatidyl-glycerole · ligand · 2 copies · chains B, D, F, a, e
  • SQD · 1,2-di-O-acyl-3-O-[6-deoxy-6-sulfo-alpha-D-glucopyranosyl]-sn-glycerol · ligand · chains D, F, d, e
  • FES · Fe2/s2 (inorganic) cluster · ligand · chains c

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7WFF · Subcomplexes B,M and L in the Cylic electron transfer supercomplex NDH-PSI from… · the same entry in another collection · chain d against d, TM-score 1.00

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