MolNFT v1 · #190043 · protein
Cryo EM structure of SARS-cov-2 spike in complex with tau-2212 mabs in conformation 4
7WCD: “Cryo EM structure of SARS-cov-2 spike in complex with tau-2212 mabs in conformation 4”. Electron microscopy, 1 ligand (NAG). MolNFT v1 #190043 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7WCD
- Type
- protein
- Length
- 4,284 residues
- Chains
- 9
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P0DTC2
- Ligands
- NAG
Structure
electron microscopy · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| H, J, C | — | protein | 1000 | — | P0DTC2 |
| E, G, A | — | protein | 214 | — | — |
| F, I, B | — | protein | 214 | — | — |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 33 copies · chains H, C, J
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7WCD · Cryo EM structure of SARS-CoV-2 spike in complex with TAU-2212 mAbs in conformation 4 · the same entry in another collection · chain H against H, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0DTC2
- Elsewhere: RCSB PDB 7WCD · PDBe 7WCD · UniProt P0DTC2
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