MolNFT v1 · #189915 · protein
Crystal structure of a bacterial otu dub with ub-pa
7W54: “Crystal structure of a bacterial otu dub with ub-pa”. X-ray diffraction, 1 ligand (AYE). MolNFT v1 #189915 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7W54
- Type
- protein
- Length
- 1,325 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q5ZTB4, J3QS39
- Ligands
- AYE
Structure
x-ray diffraction · 5 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 513 | — | Q5ZTB4 |
| B | — | protein | 518 | — | Q5ZTB4 |
| C, E | — | protein | 75 | — | J3QS39 |
| D | — | protein | 73 | — | J3QS39 |
| F | — | protein | 71 | — | J3QS39 |
Ligands and binding sites
- AYE · prop-2-en-1-amine · ligand · 2 copies · chains A, C, D, B, E, F
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7W54 · Crystal structure of a bacterial OTU DUB with Ub-PA · the same entry in another collection · chain E against E, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5ZTB4
- Every structure of UniProt J3QS39
- Elsewhere: RCSB PDB 7W54 · PDBe 7W54 · UniProt Q5ZTB4 · UniProt J3QS39
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