MolNFT v1 · #189601 · protein
Crystal structure of murine N-acetylglucosaminyl transferase iva (gnt- iva) lectin domain in unliganded form
7VMT: “Crystal structure of murine N-acetylglucosaminyl transferase iva (gnt- iva) lectin domain in unliganded form”. X-ray diffraction. MolNFT v1 #189601 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7VMT
- Type
- protein
- Length
- 859 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q812G0
Structure
x-ray diffraction · 6 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 140 | — | Q812G0 |
| B | — | protein | 146 | — | Q812G0 |
| C | — | protein | 139 | — | Q812G0 |
| D | — | protein | 145 | — | Q812G0 |
| E | — | protein | 144 | — | Q812G0 |
| F | — | protein | 145 | — | Q812G0 |
Ligands and binding sites
- BTB · 2-[bis-(2-hydroxy-ethyl)-amino]-2-hydroxymethyl-propane-1,3-diol · additive · 3 copies · chains A, B, F
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7VMT · Crystal structure of murine N-acetylglucosaminyl transferase IVa (GnT-IVa) lectin domain… · the same entry in another collection · chain F against F, TM-score 1.00
- Q812G0 · AlphaFold monomer V2.0 prediction for alpha-1,3-mannosyl-glycoprotein… · a predicted model of the same protein · chain A against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q812G0
- Elsewhere: RCSB PDB 7VMT · PDBe 7VMT · UniProt Q812G0
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