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MolNFT v1 · #189499 · protein

Crystal structure of AU(200EQ)-apo-R168H/L169C-rhlfr

7VIS · Ferritin light chain: “Crystal structure of AU(200EQ)-apo-R168H/L169C-rhlfr”. X-ray diffraction, 4 ligands (AU, CD, CL), 1 pocket (best druggability 0.43). MolNFT v1 #189499 on GenesisL1: 3D structure, binding sites and pockets in…

PDB
7VIS
Type
protein
Length
171 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Ferritin light chain
UniProt
P02791
Ligands
AU, CD, CL, SO4
Pockets
1 · best druggability 0.43

Structure

x-ray diffraction · 1 distinct chain · 76% helix, 0% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AFerritin light chainprotein17176% helix, 0% strandP02791

Ligands and binding sites

  • AU · Gold ion · metal · 7 copies · chains A
  • CD · Cadmium ion · metal · 3 copies · chains A
  • CL · Chloride ion · ion · 2 copies · chains A
  • SO4 · Sulfate ion · ion · chains A
  • EDO · 1,2-ethanediol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
1810.430.8013empty

Compared structures

  • 7VIS · Crystal structure of Au(200EQ)-apo-R168H/L169C-rHLFr · the same entry in another collection · chain A against A, TM-score 1.00
  • P02791 · AlphaFold monomer V2.0 prediction for ferritin light chain (P02791) · a predicted model of the same protein · chain A against A, TM-score 0.91

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