MolNFT v1 · #189263 · protein
Cryo-EM structure of SARS-cov-2 S-gamma variant (P.1) in complex with angiotensin-converting enzyme 2 (ACE2) ectodomain, three ACE2-bound form conformation 1
7V82: “Cryo-EM structure of SARS-cov-2 S-gamma variant (P.1) in complex with angiotensin-converting enzyme 2 (ACE2)…”. Electron microscopy, 1 ligand (NAG). MolNFT v1 #189263 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7V82
- Type
- protein
- Length
- 4,902 residues
- Chains
- 6
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P0DTC2, Q9BYF1
- Ligands
- NAG
Structure
electron microscopy · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C | — | protein | 1038 | — | P0DTC2 |
| E, D, F | — | protein | 596 | — | Q9BYF1 |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 84 copies · chains A, B, C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7V82 · Cryo-EM structure of SARS-CoV-2 S-Gamma variant (P.1) in complex with… · the same entry in another collection · chain D against D, TM-score 1.00
- 3SCJ · Crystal structure of spike protein receptor-binding domain from a predicted SARS… · a predicted model of the same protein · chain F against A, TM-score 0.98
- 3SCJ · Crystal structure of spike protein receptor-binding domain from a predicted SARS… · a predicted model of the same protein · chain F against A, TM-score 0.98
- 3SCK · Crystal structure of spike protein receptor-binding domain from a predicted SARS… · a predicted model of the same protein · chain F against A, TM-score 0.98
- 3SCK · Crystal structure of spike protein receptor-binding domain from a predicted SARS… · a predicted model of the same protein · chain F against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0DTC2
- Every structure of UniProt Q9BYF1
- Elsewhere: RCSB PDB 7V82 · PDBe 7V82 · UniProt P0DTC2 · UniProt Q9BYF1
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