MolNFT v1 · #189087 · protein
Local cryoem structure DEL68-76/DEL679-688 prefusion-stabilized spike
7V22 · Spike glycoprotein: “Local cryoem structure DEL68-76/DEL679-688 prefusion-stabilized spike”. Electron microscopy, 1 pocket (best druggability 0.38). MolNFT v1 #189087 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7V22
- Type
- protein
- Length
- 240 residues
- Chains
- 1
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Spike glycoprotein
- UniProt
- P0DTC2
- Pockets
- 1 · best druggability 0.38
Structure
electron microscopy · 1 distinct chain · 0% helix, 47% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Spike glycoprotein | protein | 240 | 0% helix, 47% strand | P0DTC2 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 90 | 0.38 | 0.76 | 24 | empty |
Modifications
Observed in the structure: 2 disulfide (disulfide).
Compared structures
- 7V22 · Local CryoEM structure del68-76/del679-688 prefusion-stabilized spike · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0DTC2
- Elsewhere: RCSB PDB 7V22 · PDBe 7V22 · UniProt P0DTC2
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