MolNFT v1 · #188944 · protein
Human mitochondrial aaa protein ATAD1 (with a catalytic dead mutation) in complex with a peptide substrate (open conformation)
7UPT: “Human mitochondrial aaa protein ATAD1 (with a catalytic dead mutation) in complex with a peptide substrate…”. Electron microscopy, 3 ligands (ATP, ADP, MG). MolNFT v1 #188944 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 7UPT
- Type
- protein
- Length
- 1,702 residues
- Chains
- 7
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q8NBU5
- Ligands
- ATP, ADP, MG
Structure
electron microscopy · 7 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 273 | — | Q8NBU5 |
| B | — | protein | 297 | — | Q8NBU5 |
| C | — | protein | 299 | — | Q8NBU5 |
| D | — | protein | 294 | — | Q8NBU5 |
| E | — | protein | 293 | — | Q8NBU5 |
| F | — | protein | 236 | — | Q8NBU5 |
| G | — | protein | 10 | — | — |
Ligands and binding sites
- ATP · Adenosine-5'-triphosphate · ligand · 5 copies · chains B, D, C, A, E, F
- ADP · Adenosine-5'-diphosphate · ligand · chains A
- MG · Magnesium ion · metal · 5 copies · chains B, C, A, D, E, F
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7UPT · Human mitochondrial AAA protein ATAD1 (with a catalytic dead mutation) in complex with a… · the same entry in another collection · chain E against E, TM-score 1.00
- Q8NBU5 · AlphaFold monomer V2.0 prediction for outer mitochondrial transmembrane helix translocase… · a predicted model of the same protein · chain A against A, TM-score 0.95
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8NBU5
- Elsewhere: RCSB PDB 7UPT · PDBe 7UPT · UniProt Q8NBU5
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