MolNFT v1 · #188942 · protein
Human mitochondrial aaa protein ATAD1 (with a catalytic dead mutation) in complex with a peptide substrate (closed conformation)
7UPR: “Human mitochondrial aaa protein ATAD1 (with a catalytic dead mutation) in complex with a peptide substrate…”. Electron microscopy, 2 ligands (ATP, MG). MolNFT v1 #188942 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7UPR
- Type
- protein
- Length
- 1,688 residues
- Chains
- 7
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q8NBU5
- Ligands
- ATP, MG
Structure
electron microscopy · 7 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| C | — | protein | 298 | — | Q8NBU5 |
| B | — | protein | 277 | — | Q8NBU5 |
| E | — | protein | 300 | — | Q8NBU5 |
| D | — | protein | 299 | — | Q8NBU5 |
| F | — | protein | 269 | — | Q8NBU5 |
| A | — | protein | 235 | — | Q8NBU5 |
| G | — | protein | 10 | — | — |
Ligands and binding sites
- ATP · Adenosine-5'-triphosphate · ligand · 5 copies · chains C, D, B, E, F
- MG · Magnesium ion · metal · 4 copies · chains C, D, B, E, F
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7UPR · Human mitochondrial AAA protein ATAD1 (with a catalytic dead mutation) in complex with a… · the same entry in another collection · chain G against G, TM-score 1.00
- Q8NBU5 · AlphaFold monomer V2.0 prediction for outer mitochondrial transmembrane helix translocase… · a predicted model of the same protein · chain B against A, TM-score 0.94
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8NBU5
- Elsewhere: RCSB PDB 7UPR · PDBe 7UPR · UniProt Q8NBU5
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