MolNFT v1 · #188661 · protein
The structure of phosphoglucose isomerase from aspergillus fumigatus
7U34 · Glucose-6-phosphate isomerase: “The structure of phosphoglucose isomerase from aspergillus fumigatus”. X-ray diffraction, 2 ligands (NA, CL), 4 pockets (best druggability 0.61). MolNFT v1 #188661 on GenesisL1: 3D structure, binding…
- PDB
- 7U34
- Type
- protein
- Length
- 557 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Glucose-6-phosphate isomerase
- EC
- 5.3.1.9
- UniProt
- A0A229XY52
- Ligands
- NA, CL
- Pockets
- 4 · best druggability 0.61
Structure
x-ray diffraction · 1 distinct chain · 53% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Glucose-6-phosphate isomerase (EC 5.3.1.9) | protein | 557 | 53% helix, 12% strand | A0A229XY52 |
Ligands and binding sites
- NA · Sodium ion · metal · 4 copies · chains A
- CL · Chloride ion · ion · 2 copies · chains A
- GOL · Glycerol · additive · 3 copies · chains A
- FLC · Citrate anion · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 329 | 0.61 | 0.78 | 37 | empty |
| 2 | 142 | 0.47 | 0.78 | 21 | empty |
| 3 | 76 | 0.44 | 0.81 | 21 | GOL |
| 4 | 110 | 0.40 | 0.76 | 24 | GOL |
Compared structures
- 7U34 · The structure of phosphoglucose isomerase from Aspergillus fumigatus · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A229XY52
- Elsewhere: RCSB PDB 7U34 · PDBe 7U34 · UniProt A0A229XY52
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