MolNFT v1 · #188254 · protein
Structure of the light harvesting complex PE545 from proteomonas sulcata
7TJA: “Structure of the light harvesting complex PE545 from proteomonas sulcata”. X-ray diffraction, 3 ligands (PEB, DBV, MG). MolNFT v1 #188254 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7TJA
- Type
- protein
- Length
- 2,056 residues
- Chains
- 18
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A067YS87, A0A067YSJ2
- Ligands
- PEB, DBV, MG
Structure
x-ray diffraction · 14 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 72 | — | A0A067YS87 |
| Q | — | protein | 61 | — | A0A067YSJ2 |
| B | — | protein | 167 | — | — |
| C | — | protein | 60 | — | A0A067YSJ2 |
| R | — | protein | 70 | — | A0A067YS87 |
| D | — | protein | 174 | — | — |
| E, M | — | protein | 74 | — | A0A067YS87 |
| G, K, O | — | protein | 67 | — | A0A067YSJ2 |
| F | — | protein | 166 | — | — |
| H | — | protein | 173 | — | — |
| I | — | protein | 75 | — | A0A067YS87 |
| J, L | — | protein | 173 | — | — |
| N | — | protein | 170 | — | — |
| P | — | protein | 173 | — | — |
Ligands and binding sites
- PEB · Phycoerythrobilin · ligand · 24 copies · chains A, Q, B, R, D, C, E, F, H, G, I, J, K, L, M, N, P, O
- DBV · 15,16-dihydrobiliverdin · ligand · 10 copies · chains A, Q, C, R, D, B, E, G, F, H, I, K, J, L, M, O, N, P
- MG · Magnesium ion · metal · chains K, J
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7TJA · Structure of the Light Harvesting Complex PE545 from Proteomonas sulcata · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A067YS87
- Every structure of UniProt A0A067YSJ2
- Elsewhere: RCSB PDB 7TJA · PDBe 7TJA · UniProt A0A067YS87 · UniProt A0A067YSJ2
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