MolNFT v1 · #188196 · protein
Crystal structure of AMP+PPI bound desd, the desferrioxamine synthetase from the streptomyces griseoflavus ferrimycin biosynthetic pathway
7TGL: “Crystal structure of AMP+PPI bound desd, the desferrioxamine synthetase from the streptomyces griseoflavus…”. X-ray diffraction, 4 ligands (PPV, AMP, MG). MolNFT v1 #188196 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 7TGL
- Type
- protein
- Length
- 2,955 residues
- Chains
- 5
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Ligands
- PPV, AMP, MG, SO4
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 590 | — | — |
| B | — | protein | 592 | — | — |
| C, E | — | protein | 591 | — | — |
| D | — | protein | 591 | — | — |
Ligands and binding sites
- PPV · Pyrophosphate · ligand · 5 copies · chains A, B, C, D, E
- AMP · Adenosine monophosphate · ligand · 5 copies · chains A, B, C, D, E
- MG · Magnesium ion · metal · 10 copies · chains A, B, C, D, E
- SO4 · Sulfate ion · ion · 8 copies · chains A, B, D, E
- GOL · Glycerol · additive · 14 copies · chains A, B, C, D, E
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7TGL · Crystal structure of AMP+PPi bound DesD, the desferrioxamine synthetase from the… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 7TGL · PDBe 7TGL
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