MolNFT v1 · #188190 · protein

Cryo-EM of the omce nanowires from geobacter sulfurreducens

7TFS · Cytochrome C: “Cryo-EM of the omce nanowires from geobacter sulfurreducens”. Electron microscopy, 1 ligand (HEC), 1 pocket (best druggability 0.78). MolNFT v1 #188190 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 7TFS
Type: protein
Length: 202 residues
Chains: 1
Method: electron microscopy
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Cytochrome C
UniProt: Q74FJ0
Ligands: HEC
Pockets: 1 · best druggability 0.78

Structure

electron microscopy · 1 distinct chain · 16% helix, 11% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Cytochrome C	protein	202	16% helix, 11% strand	Q74FJ0

Ligands and binding sites

HEC · Heme C · ligand · 4 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	955	0.78	0.80	75	HEC

Modifications

Observed in the structure: 8 cofactor (heme c attachment).

Compared structures

7TFS · Cryo-EM of the OmcE nanowires from Geobacter sulfurreducens · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q74FJ0
Elsewhere: RCSB PDB 7TFS · PDBe 7TFS · UniProt Q74FJ0

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