MolNFT v1 · #188158 · protein + DNA
Structure of the listeria monocytogenes glnr-DNA complex to 3.45 ångström
7TEC · Hth-type transcriptional regulator glnr: “Structure of the listeria monocytogenes glnr-DNA complex to 3.45 ångström”. X-ray diffraction, 1 pocket (best druggability 0.26). MolNFT v1 #188158 on GenesisL1: 3D structure, binding sites…
- PDB
- 7TEC
- Type
- protein + DNA
- Length
- 93 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Hth-type transcriptional regulator glnr; DNA (5'…
- UniProt
- L8DSZ4
- Pockets
- 1 · best druggability 0.26
Structure
x-ray diffraction · 2 distinct chains · 39% helix, 8% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Hth-type transcriptional regulator glnr | protein | 72 | 39% helix, 8% strand | L8DSZ4 |
| H | DNA (5'- D(*CP*GP*TP*GP*TP*CP*AP*GP*AP*TP*AP*AP*TP*CP*TP*GP*AP*CP*AP*CP*G)- 3') | dna | 21 | — | — |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 55 | 0.26 | 0.74 | 10 | empty |
Interfaces
1 interface between chains.
- A–H · 337 Ų buried · 7 hydrogen bonds · protein-nucleic
Compared structures
- 7TEC · Structure of the Listeria monocytogenes GlnR-DNA complex to 3.45 Angstrom · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt L8DSZ4
- Elsewhere: RCSB PDB 7TEC · PDBe 7TEC · UniProt L8DSZ4
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